STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN03159343_1258Polar amino acid transport system substrate-binding protein. (326 aa)    
Predicted Functional Partners:
SAMN03159343_1260
Polar amino acid transport system permease protein.
  0.976
SAMN03159343_1259
Polar amino acid transport system ATP-binding protein.
 0.951
SAMN03159343_0940
Polar amino acid transport system permease protein.
  0.948
SAMN03159343_1261
Acetyltransferase (GNAT) family protein.
    0.906
SAMN03159343_2218
Glutamate transport system permease protein.
 
 0.890
SAMN03159343_4023
Amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-).
 
 0.883
SAMN03159343_0939
Polar amino acid transport system ATP-binding protein.
 0.833
SAMN03159343_4024
Amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-).
 
 0.796
SAMN03159343_2217
Glutamate transport system permease protein.
 
 0.794
SAMN03159343_1257
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-).
 
    
0.784
Your Current Organism:
Klenkia marina
NCBI taxonomy Id: 1960309
Other names: Actinobacteria bacterium DSM 45722, CCTCC AB 2012057, CCTCC:AB:2012057, DSM 45722, Geodermatophilus sp. YIM M1316, K. marina, Klenkia marina Montero-Calasanz et al. 2018, YIM M13156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.