STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN03159343_1599NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. (452 aa)    
Predicted Functional Partners:
SAMN03159343_2419
Glutamate synthase (NADPH/NADH) large chain.
    
 0.965
SAMN03159343_0015
Ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 0.921
SAMN03159343_0933
Ferredoxin-NADP reductase.
  
 0.921
SAMN03159343_0946
Ferredoxin-NADP reductase.
  
 0.921
SAMN03159343_3087
Vanillate O-demethylase ferredoxin subunit.
  
 0.921
SAMN03159343_3262
Ferredoxin-NADP reductase.
  
 0.921
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
 
 0.882
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
   
   0.876
SAMN03159343_0161
Copper transport protein.
    
   0.874
SAMN03159343_4145
CopC domain-containing protein.
    
   0.874
Your Current Organism:
Klenkia marina
NCBI taxonomy Id: 1960309
Other names: Actinobacteria bacterium DSM 45722, CCTCC AB 2012057, CCTCC:AB:2012057, DSM 45722, Geodermatophilus sp. YIM M1316, K. marina, Klenkia marina Montero-Calasanz et al. 2018, YIM M13156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.