STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN03159343_2476Predicted oxidoreductase. (291 aa)    
Predicted Functional Partners:
SAMN03159343_3905
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
    
 0.661
SAMN03159343_2477
Recombination protein MgsA.
       0.556
SAMN03159343_1242
2,5-diketo-D-gluconate reductase A.
 
 
0.554
SAMN03159343_3441
Aldo/keto reductase.
 
 
0.551
SAMN03159343_3704
Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.430
SAMN03159343_3919
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.430
SAMN03159343_2478
Uncharacterized protein YoxC, contains an MCP-like domain.
  
    0.404
Your Current Organism:
Klenkia marina
NCBI taxonomy Id: 1960309
Other names: Actinobacteria bacterium DSM 45722, CCTCC AB 2012057, CCTCC:AB:2012057, DSM 45722, Geodermatophilus sp. YIM M1316, K. marina, Klenkia marina Montero-Calasanz et al. 2018, YIM M13156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.