STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN03159343_3094Catechol 1,2-dioxygenase. (300 aa)    
Predicted Functional Partners:
SAMN03159343_3093
Maleylacetate reductase.
  
 0.997
SAMN03159343_1028
2,4-dichlorophenol 6-monooxygenase.
 
  
 0.772
SAMN03159343_3023
CDP-4-dehydro-6-deoxyglucose reductase.
 
 
 0.694
SAMN03159343_3030
Muconolactone Delta-isomerase; Belongs to the muconolactone Delta-isomerase family.
 
  
 0.671
SAMN03159343_3074
Muconolactone Delta-isomerase; Belongs to the muconolactone Delta-isomerase family.
 
  
 0.667
SAMN03159343_0215
Alkylhydroperoxidase AhpD family core domain-containing protein.
 
     0.650
SAMN03159343_1673
P-hydroxybenzoate 3-monooxygenase.
 
  
 0.646
SAMN03159343_3031
Muconate cycloisomerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.643
SAMN03159343_3092
Phenylacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.623
SAMN03159343_3073
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.613
Your Current Organism:
Klenkia marina
NCBI taxonomy Id: 1960309
Other names: Actinobacteria bacterium DSM 45722, CCTCC AB 2012057, CCTCC:AB:2012057, DSM 45722, Geodermatophilus sp. YIM M1316, K. marina, Klenkia marina Montero-Calasanz et al. 2018, YIM M13156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.