STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN03159343_3616Signal transduction histidine kinase. (456 aa)    
Predicted Functional Partners:
SAMN03159343_3615
DNA-binding response regulator, OmpR family, contains REC and winged-helix (WHTH) domain.
 0.983
SAMN03159343_1741
Two-component system, OmpR family, response regulator.
 0.927
SAMN03159343_1692
Two-component system, OmpR family, response regulator.
 0.926
SAMN03159343_1791
Two-component system, OmpR family, response regulator RegX3.
 0.924
SAMN03159343_2656
Two-component system, OmpR family, response regulator MtrA.
 0.924
SAMN03159343_3461
DNA-binding response regulator, OmpR family, contains REC and winged-helix (WHTH) domain.
 0.923
SAMN03159343_3216
DNA-binding response regulator, OmpR family, contains REC and winged-helix (WHTH) domain.
 0.922
SAMN03159343_1179
DNA-binding response regulator, OmpR family, contains REC and winged-helix (WHTH) domain.
 0.919
SAMN03159343_0155
Two-component system, OmpR family, KDP operon response regulator KdpE.
 0.917
SAMN03159343_1563
DNA-binding response regulator, OmpR family, contains REC and winged-helix (WHTH) domain.
 0.911
Your Current Organism:
Klenkia marina
NCBI taxonomy Id: 1960309
Other names: Actinobacteria bacterium DSM 45722, CCTCC AB 2012057, CCTCC:AB:2012057, DSM 45722, Geodermatophilus sp. YIM M1316, K. marina, Klenkia marina Montero-Calasanz et al. 2018, YIM M13156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.