STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN03159343_3639Peptide/nickel transport system substrate-binding protein. (576 aa)    
Predicted Functional Partners:
SAMN03159343_0118
Peptide/nickel transport system permease protein.
 0.921
SAMN03159343_3057
Peptide/nickel transport system permease protein.
 
 0.917
SAMN03159343_2577
Peptide/nickel transport system permease protein.
 
 0.908
SAMN03159343_1219
Peptide/nickel transport system permease protein.
 
 0.907
SAMN03159343_0324
Peptide/nickel transport system permease protein.
 0.906
SAMN03159343_0117
Peptide/nickel transport system permease protein.
 
 0.899
SAMN03159343_0816
Peptide/nickel transport system permease protein.
 
 0.891
SAMN03159343_3985
Peptide/nickel transport system permease protein.
 
 0.890
SAMN03159343_0116
Peptide/nickel transport system substrate-binding protein.
  
  
  0.884
SAMN03159343_0325
Peptide/nickel transport system permease protein.
 
 0.880
Your Current Organism:
Klenkia marina
NCBI taxonomy Id: 1960309
Other names: Actinobacteria bacterium DSM 45722, CCTCC AB 2012057, CCTCC:AB:2012057, DSM 45722, Geodermatophilus sp. YIM M1316, K. marina, Klenkia marina Montero-Calasanz et al. 2018, YIM M13156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.