STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHISP_08543Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (101 aa)    
Predicted Functional Partners:
PHISP_01958
Ubiquitin-protein ligase.
   
 0.970
PHISP_06988
Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family.
   
 0.965
PHISP_03494
Ubiquitin.
   
 0.948
PHISP_00234
Transcription initiation factor RRN7.
   
 0.939
PHISP_03672
Uncharacterized protein.
    
 0.936
PHISP_06876
Ring-box protein.
    
 0.930
PHISP_08309
Ubiquitin thiolesterase OtuB1.
    
 0.927
PHISP_08384
U-box domain protein.
    
 0.918
PHISP_06933
Glutaryl-CoA dehydrogenase.
 
  
  0.913
PHISP_03212
Ubiquitin-like domain-containing protein.
   
 0.889
Your Current Organism:
Phialosimplex sp. HF37
NCBI taxonomy Id: 1960876
Other names: P. sp. HF37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.