STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHISP_07358HMG box protein. (534 aa)    
Predicted Functional Partners:
PHISP_01958
Ubiquitin-protein ligase.
    
 
 0.756
PHISP_07379
Uracil phosphoribosyltransferase.
   
 0.680
PHISP_05937
Uracil phosphoribosyltransferase.
   
 0.680
PHISP_04983
Mating type.
    
 0.671
PHISP_00991
HMG box transcriptional regulator.
    
 0.671
PHISP_00990
Uncharacterized protein.
    
 0.671
PHISP_00993
Nicotinamide riboside kinase.
   
 0.655
PHISP_08294
STYKc; Belongs to the protein kinase superfamily.
    
 
 0.509
PHISP_05931
Meiosis protein MEI2.
   
  
 0.495
PHISP_00701
Kinase kinase kinase.
   
 
 0.459
Your Current Organism:
Phialosimplex sp. HF37
NCBI taxonomy Id: 1960876
Other names: P. sp. HF37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.