STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHISP_07614Carnitine; Belongs to the carnitine/choline acetyltransferase family. (610 aa)    
Predicted Functional Partners:
PHISP_06285
Multifunctional beta-oxidation protein.
   
 0.957
PHISP_06580
Carnitine acetyl transferase.
  
0.948
PHISP_08823
MaoC-like domain-containing protein.
   
 0.913
PHISP_02705
Nonspecific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.912
PHISP_00680
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.855
PHISP_04819
Peroxisomal targeting signal receptor.
    
 0.851
PHISP_00144
Short chain dehydrogenase.
   
 0.842
PHISP_02658
Carnitine acyl carnitine carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.834
PHISP_04240
Glycerophosphoryl diester phosphodiesterase family.
    
 0.783
PHISP_00804
Ankyrin repeat protein.
    
 0.783
Your Current Organism:
Phialosimplex sp. HF37
NCBI taxonomy Id: 1960876
Other names: P. sp. HF37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.