STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHISP_07608Uncharacterized protein. (182 aa)    
Predicted Functional Partners:
PHISP_06547
Small nuclear ribonucleoprotein Sm D2.
   
 0.965
PHISP_00695
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.965
PHISP_07700
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
   
 0.959
PHISP_05236
Acetyltransferase.
    
 0.955
PHISP_05698
zf-U1 domain-containing protein.
   
 0.950
PHISP_06059
Uncharacterized protein.
   
 0.948
PHISP_02506
Small nuclear ribonucleoprotein.
   
 0.948
PHISP_03128
Tr-type G domain-containing protein.
   
 0.944
PHISP_06723
Splicing factor 3b.
   
 0.937
PHISP_03374
Splicing factor subunit; Belongs to the SF3B5 family.
   
  0.937
Your Current Organism:
Phialosimplex sp. HF37
NCBI taxonomy Id: 1960876
Other names: P. sp. HF37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.