STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHISP_07173Yippee family. (275 aa)    
Predicted Functional Partners:
PHISP_07172
Ornithine decarboxylase antizyme.
 
      0.898
PHISP_05880
Degradation protein.
   
 
 0.828
PHISP_05315
Ran-binding protein.
   
 
 0.808
PHISP_06476
Sporulation protein RMD5.
    
 
 0.787
PHISP_05362
Uncharacterized protein.
   
 
 0.614
PHISP_02734
B30.2/SPRY domain-containing protein.
   
 
 0.614
PHISP_04680
Uncharacterized protein.
   
 
 0.537
PHISP_07081
F-box domain protein.
   
 
 0.415
Your Current Organism:
Phialosimplex sp. HF37
NCBI taxonomy Id: 1960876
Other names: P. sp. HF37
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