STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHISP_06774Methyltranfer_dom domain-containing protein. (644 aa)    
Predicted Functional Partners:
PHISP_08087
Zinc_ribbon_16 domain-containing protein.
    
 0.880
PHISP_05531
WD repeat protein.
    
 0.818
PHISP_05913
Nuclear pore protein; Belongs to the WD repeat SEC13 family.
     
 0.711
PHISP_00794
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
     
 0.686
PHISP_03852
Uncharacterized protein.
     
 0.542
PHISP_04353
Mitochondrial inner membrane protease subunit.
   
 
 0.532
PHISP_05216
GTP-binding protein.
     
 0.487
PHISP_07391
GTP-binding protein.
     
 0.479
PHISP_06485
Nitrogen permease regulator.
     
 0.479
PHISP_06420
Nitrogen permease regulator.
     
 0.479
Your Current Organism:
Phialosimplex sp. HF37
NCBI taxonomy Id: 1960876
Other names: P. sp. HF37
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