PHISP_06515 protein (Phialosimplex sp. HF37)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PHISP_06515

Transport protein particle. (737 aa)

Predicted Functional Partners:

PHISP_06542

0.999

PHISP_06789

0.999

PHISP_05962

0.999

PHISP_05651

0.999

PHISP_00821

0.999

PHISP_01368

0.998

PHISP_06708

0.996

PHISP_02287

0.995

PHISP_02713

0.993

PHISP_07256

0.982

Your Current Organism:

Phialosimplex sp. HF37

NCBI taxonomy Id: 1960876
Other names: P. sp. HF37

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PHISP_00821	PHISP_01368	A0A3M2TEV5	A0A3M2TDC2	Uncharacterized protein.	Uncharacterized protein.	0.997
PHISP_00821	PHISP_02287	A0A3M2TEV5	A0A3M2TAQ1	Uncharacterized protein.	Hypercellular protein.	0.999
PHISP_00821	PHISP_02713	A0A3M2TEV5	A0A3M2T9K3	Uncharacterized protein.	DUF974 domain-containing protein.	0.995
PHISP_00821	PHISP_05651	A0A3M2TEV5	A0A3M2T0Y1	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999
PHISP_00821	PHISP_05962	A0A3M2TEV5	A0A3M2T024	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999
PHISP_00821	PHISP_06515	A0A3M2TEV5	A0A3M2SYE3	Uncharacterized protein.	Transport protein particle.	0.999
PHISP_00821	PHISP_06542	A0A3M2TEV5	A0A3M2SYF9	Uncharacterized protein.	Transport protein particle.	0.999
PHISP_00821	PHISP_06708	A0A3M2TEV5	A0A3M2SZ85	Uncharacterized protein.	TMEM1 family.	0.999
PHISP_00821	PHISP_06789	A0A3M2TEV5	A0A3M2SZ15	Uncharacterized protein.	Trafficking protein particle complex subunit BET3.	0.999
PHISP_00821	PHISP_07256	A0A3M2TEV5	A0A3M2SWZ1	Uncharacterized protein.	Bet3 family.	0.985
PHISP_01368	PHISP_00821	A0A3M2TDC2	A0A3M2TEV5	Uncharacterized protein.	Uncharacterized protein.	0.997
PHISP_01368	PHISP_02287	A0A3M2TDC2	A0A3M2TAQ1	Uncharacterized protein.	Hypercellular protein.	0.993
PHISP_01368	PHISP_02713	A0A3M2TDC2	A0A3M2T9K3	Uncharacterized protein.	DUF974 domain-containing protein.	0.998
PHISP_01368	PHISP_05651	A0A3M2TDC2	A0A3M2T0Y1	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.998
PHISP_01368	PHISP_05962	A0A3M2TDC2	A0A3M2T024	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.996
PHISP_01368	PHISP_06515	A0A3M2TDC2	A0A3M2SYE3	Uncharacterized protein.	Transport protein particle.	0.998
PHISP_01368	PHISP_06542	A0A3M2TDC2	A0A3M2SYF9	Uncharacterized protein.	Transport protein particle.	0.996
PHISP_01368	PHISP_06708	A0A3M2TDC2	A0A3M2SZ85	Uncharacterized protein.	TMEM1 family.	0.993
PHISP_01368	PHISP_06789	A0A3M2TDC2	A0A3M2SZ15	Uncharacterized protein.	Trafficking protein particle complex subunit BET3.	0.997
PHISP_01368	PHISP_07256	A0A3M2TDC2	A0A3M2SWZ1	Uncharacterized protein.	Bet3 family.	0.878