STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHISP_06508Uncharacterized protein. (238 aa)    
Predicted Functional Partners:
PHISP_00695
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
  0.976
PHISP_06547
Small nuclear ribonucleoprotein Sm D2.
    
 0.969
PHISP_03587
Small nuclear ribonucleoprotein.
    
  0.966
PHISP_03588
Uncharacterized protein.
    
  0.952
PHISP_06509
Transcription initiation factor TFIID.
 
      0.894
PHISP_03586
DUF866 domain-containing protein.
    
  0.817
PHISP_01793
GTP-binding protein EsdC.
    
  0.817
PHISP_06599
Small nuclear ribonucleoprotein.
    
 0.724
PHISP_07605
Sm domain-containing protein.
    
 0.723
PHISP_07608
Uncharacterized protein.
    
 0.723
Your Current Organism:
Phialosimplex sp. HF37
NCBI taxonomy Id: 1960876
Other names: P. sp. HF37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.