STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHISP_06262Homeobox domain-containing protein. (576 aa)    
Predicted Functional Partners:
PHISP_03345
Diaminopropionate ammonia-lyase.
 
      0.898
PHISP_03139
Diaminopropionate ammonia-lyase.
 
      0.745
PHISP_01982
Transcription factor.
   
 
 0.690
PHISP_05743
Histone deacetylase.
    
 0.598
PHISP_03166
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.598
PHISP_06857
Uncharacterized protein.
   
 0.595
PHISP_04545
Uncharacterized protein.
   
 0.595
PHISP_08158
Histone deacetylase.
    
  0.534
PHISP_08159
Uncharacterized protein.
    
  0.534
PHISP_04244
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
  0.534
Your Current Organism:
Phialosimplex sp. HF37
NCBI taxonomy Id: 1960876
Other names: P. sp. HF37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.