STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHISP_05730RRM domain-containing protein. (386 aa)    
Predicted Functional Partners:
PHISP_07901
Uncharacterized protein.
   
 0.999
PHISP_07618
SKIP_SNW domain-containing protein.
   
 0.999
PHISP_04039
Uncharacterized protein.
   
 0.999
PHISP_03149
Uncharacterized protein.
  
 0.999
PHISP_01745
Uncharacterized protein.
   
 0.999
PHISP_04275
Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.
    
 0.998
PHISP_02913
RRM domain-containing protein.
   
 0.998
PHISP_07107
Splicing factor.
   
 
 0.990
PHISP_00751
Uncharacterized protein.
   
 
 0.990
PHISP_06663
Factor cef-1.
   
 
 0.989
Your Current Organism:
Phialosimplex sp. HF37
NCBI taxonomy Id: 1960876
Other names: P. sp. HF37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.