STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHISP_04894Zinc finger protein. (149 aa)    
Predicted Functional Partners:
PHISP_07744
Zinc finger protein.
 
      0.899
PHISP_01762
U2 snRNP component IST3.
   
   0.811
PHISP_05312
Uncharacterized protein.
    
 0.787
PHISP_04957
CPSF_A domain-containing protein.
    
   0.781
PHISP_00050
SF3b1 domain-containing protein.
    
   0.781
PHISP_06642
Matrin-type domain-containing protein.
    
 
 0.712
PHISP_05878
C2H2-type domain-containing protein.
    
 
 0.700
PHISP_05082
Uncharacterized protein.
   
   0.612
PHISP_02884
Uncharacterized protein.
   
   0.612
PHISP_03128
Tr-type G domain-containing protein.
    
   0.587
Your Current Organism:
Phialosimplex sp. HF37
NCBI taxonomy Id: 1960876
Other names: P. sp. HF37
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.