STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHISP_03566Ubiquitin thioesterase OTU1. (332 aa)    
Predicted Functional Partners:
PHISP_08532
Cell division control protein; Belongs to the AAA ATPase family.
   
 0.967
PHISP_05597
Cell division control protein; Belongs to the AAA ATPase family.
   
 0.967
PHISP_01445
UBX domain-containing protein.
   
 
 0.966
PHISP_03494
Ubiquitin.
    
 
 0.962
PHISP_01228
Ubiquitin fusion degradation protein.
   
 
 0.962
PHISP_05371
Polyubiquitin binding protein.
    
 
 0.960
PHISP_03430
MPN domain-containing protein.
    
 
 0.955
PHISP_01315
Ubiquitin conjugation factor E4.
    
 
 0.952
PHISP_08079
AAA family ATPase.
   
 0.941
PHISP_02249
Ubiquitin fusion degradation protein.
   
 
 0.926
Your Current Organism:
Phialosimplex sp. HF37
NCBI taxonomy Id: 1960876
Other names: P. sp. HF37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.