STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHISP_01500Seryl-trna synthetase. (473 aa)    
Predicted Functional Partners:
PHISP_04055
Uncharacterized protein.
    
 
 0.910
PHISP_05282
SAGA complex component.
    
 
 0.902
PHISP_08490
Transcription initiation factor TFIID.
    
 
 0.894
PHISP_04976
TFIID_20kDa domain-containing protein.
    
 
 0.893
PHISP_06419
Transcriptional regulator Ngg1.
    
 
 0.888
PHISP_01879
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
   0.886
PHISP_01434
Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family.
    
   0.886
PHISP_06069
Carrier domain-containing protein.
   
 
 0.866
PHISP_05930
Rheb small monomeric GTPase.
 
      0.856
TRM8
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
 
 0.848
Your Current Organism:
Phialosimplex sp. HF37
NCBI taxonomy Id: 1960876
Other names: P. sp. HF37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.