STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHISP_01338Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family. (372 aa)    
Predicted Functional Partners:
PHISP_04397
Saccharopine dehydrogenase.
  
 
 0.968
PHISP_03956
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.789
PHISP_02088
Aspartate-semialdehyde dehydrogenase.
   
 
 0.667
PHISP_06965
L-aminoadipate-semialdehyde dehydrogenase, large subunit.
 
 0.657
PHISP_08069
Homo-isocitrate dehydrogenase.
   
  
 0.617
PHISP_07131
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
    
 0.603
PHISP_08125
S-adenosylmethionine decarboxylase.
     
 0.573
PHISP_06623
Biotin synthase.
   
 
  0.559
PHISP_01755
Homoserine O-acetyltransferase.
    
 0.559
PHISP_01340
Uncharacterized protein.
 
      0.559
Your Current Organism:
Phialosimplex sp. HF37
NCBI taxonomy Id: 1960876
Other names: P. sp. HF37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.