STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHISP_01718Exosome complex exonuclease Rrp40. (270 aa)    
Predicted Functional Partners:
PHISP_07376
Exosome complex exonuclease rrp4.
   
 0.999
PHISP_07309
Exosome complex.
  
 0.999
PHISP_06817
Exosome complex subunit Csl4.
   
 0.999
PHISP_06341
Uncharacterized protein.
   
 0.999
PHISP_04081
Exosome complex.
  
 0.999
PHISP_02899
RNase_PH domain-containing protein.
  
 0.999
PHISP_01987
3' exoribonuclease family protein.
   
 0.999
PHISP_05949
Exosome complex exonuclease; Belongs to the RNR ribonuclease family.
   
 0.998
PHISP_01596
3' exoribonuclease family protein.
  
 0.997
PHISP_06374
Exosome-associated family.
   
 0.987
Your Current Organism:
Phialosimplex sp. HF37
NCBI taxonomy Id: 1960876
Other names: P. sp. HF37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.