STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHISP_0095960s ribosomal protein L16. (202 aa)    
Predicted Functional Partners:
PHISP_07665
60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
  
 0.999
PHISP_07479
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.999
PHISP_07622
60s ribosomal protein.
  
 0.999
PHISP_07258
60S ribosomal protein L28.
   
 0.999
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.999
PHISP_06994
60s ribosomal protein L10.
 
 0.999
PHISP_07036
60S ribosomal protein l38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.999
PHISP_06898
40S ribosomal protein S19.
   
 0.999
PHISP_06480
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 0.999
PHISP_06598
60s ribosomal protein l11; Belongs to the universal ribosomal protein uL5 family.
  
 0.999
Your Current Organism:
Phialosimplex sp. HF37
NCBI taxonomy Id: 1960876
Other names: P. sp. HF37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.