STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002140155_01700Unannotated protein. (342 aa)    
Predicted Functional Partners:
GCA_002140155_03332
Unannotated protein.
  
 0.991
GCA_002140155_00265
Unannotated protein.
  
 0.982
GCA_002140155_00271
Unannotated protein.
 
 
 0.967
GCA_002140155_04431
Unannotated protein.
 
 
 0.965
GCA_002140155_01559
Unannotated protein.
 
 0.962
GCA_002140155_00920
Unannotated protein.
  
 
 0.949
GCA_002140155_00272
Unannotated protein.
 
 
 0.933
GCA_002140155_00264
Unannotated protein.
  
 
 0.929
GCA_002140155_00899
Unannotated protein.
   
 
 0.924
GCA_002140155_05434
Unannotated protein.
 
 
 0.915
Your Current Organism:
Micromonospora sp. NBS1129
NCBI taxonomy Id: 1960879
Other names: M. sp. NBS 11-29, Micromonospora sp. NBS 11-29, Micromonospora sp. NBS 11/29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.