STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002140155_02715Unannotated protein. (167 aa)    
Predicted Functional Partners:
GCA_002140155_04474
Unannotated protein.
  
     0.648
GCA_002140155_00823
Unannotated protein.
  
     0.611
GCA_002140155_02714
Unannotated protein.
       0.610
GCA_002140155_05281
Unannotated protein.
  
     0.569
GCA_002140155_02716
Unannotated protein.
       0.563
GCA_002140155_05286
Unannotated protein.
  
     0.560
GCA_002140155_05327
Unannotated protein.
  
     0.552
GCA_002140155_04947
Unannotated protein.
  
     0.551
GCA_002140155_04394
Unannotated protein.
  
     0.539
GCA_002140155_02296
Unannotated protein.
  
     0.533
Your Current Organism:
Micromonospora sp. NBS1129
NCBI taxonomy Id: 1960879
Other names: M. sp. NBS 11-29, Micromonospora sp. NBS 11-29, Micromonospora sp. NBS 11/29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.