STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002140155_05773Unannotated protein. (543 aa)    
Predicted Functional Partners:
GCA_002140155_04132
Unannotated protein.
 
 
 0.986
GCA_002140155_01915
Unannotated protein.
   
 0.981
GCA_002140155_01541
Unannotated protein.
  
 0.974
GCA_002140155_02036
Unannotated protein.
   
 0.966
GCA_002140155_04121
Unannotated protein.
   
 0.966
GCA_002140155_02634
Unannotated protein.
  
 0.964
GCA_002140155_05377
Unannotated protein.
  
 0.954
GCA_002140155_02035
Unannotated protein.
   
 0.945
GCA_002140155_05859
Unannotated protein.
  
 
 0.945
GCA_002140155_05005
Unannotated protein.
  
 0.937
Your Current Organism:
Micromonospora sp. NBS1129
NCBI taxonomy Id: 1960879
Other names: M. sp. NBS 11-29, Micromonospora sp. NBS 11-29, Micromonospora sp. NBS 11/29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.