A0A136II21 protein (Microdochium bolleyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A136II21

GED domain-containing protein. (224 aa)

Predicted Functional Partners:

A0A136J5W3

0.725

A0A136J6X8

0.674

A0A136J2S2

0.671

A0A136IJI8

0.664

A0A136IS28

0.623

A0A136JDK4

0.597

A0A136JAN4

0.583

A0A136J1Z3

0.555

A0A136J5X6

0.555

A0A136J6L6

0.545

Your Current Organism:

Microdochium bolleyi

NCBI taxonomy Id: 196109
Other names: M. bolleyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A136II21	A0A136IJI8	GED domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.664
A0A136II21	A0A136IS28	GED domain-containing protein.	Eukaryotic porin/Tom40.	0.623
A0A136II21	A0A136J1Z3	GED domain-containing protein.	B-cell receptor-associated protein 31-like-domain-containing protein.	0.555
A0A136II21	A0A136J2S2	GED domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.671
A0A136II21	A0A136J5W3	GED domain-containing protein.	BAR domain-containing protein.	0.725
A0A136II21	A0A136J5X6	GED domain-containing protein.	Mu homology domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.555
A0A136II21	A0A136J6L6	GED domain-containing protein.	AP-1 complex subunit gamma.	0.545
A0A136II21	A0A136J6X8	GED domain-containing protein.	UBA domain-containing protein.	0.674
A0A136II21	A0A136JAN4	GED domain-containing protein.	ANTH domain-domain-containing protein.	0.583
A0A136II21	A0A136JDK4	GED domain-containing protein.	Mitochondrial fission 1 protein; Has a role in mitochondrial fission.	0.597
A0A136IJI8	A0A136II21	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	GED domain-containing protein.	0.664
A0A136IJI8	A0A136IS28	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Eukaryotic porin/Tom40.	0.623
A0A136IJI8	A0A136J1Z3	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	B-cell receptor-associated protein 31-like-domain-containing protein.	0.555
A0A136IJI8	A0A136J2S2	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.671
A0A136IJI8	A0A136J5W3	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	BAR domain-containing protein.	0.725
A0A136IJI8	A0A136J5X6	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Mu homology domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.555
A0A136IJI8	A0A136J6L6	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	AP-1 complex subunit gamma.	0.545
A0A136IJI8	A0A136J6X8	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	UBA domain-containing protein.	0.674
A0A136IJI8	A0A136JAN4	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	ANTH domain-domain-containing protein.	0.583
A0A136IJI8	A0A136JDK4	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Mitochondrial fission 1 protein; Has a role in mitochondrial fission.	0.597