A0A136IJU7 protein (Microdochium bolleyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A136IJU7

Uncharacterized protein. (300 aa)

Predicted Functional Partners:

A0A136IZG8

0.878

A0A136JC01

0.870

A0A136J2J3

0.868

A0A136JJ23

0.776

A0A136J1B4

0.703

A0A136JF88

0.700

A0A136ITZ8

0.649

A0A136ITL1

0.647

A0A136J2S8

0.637

A0A136JEZ1

0.614

Your Current Organism:

Microdochium bolleyi

NCBI taxonomy Id: 196109
Other names: M. bolleyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A136IJU7	A0A136ITL1	Uncharacterized protein.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.647
A0A136IJU7	A0A136ITZ8	Uncharacterized protein.	Mannitol-1-phosphate 5-dehydrogenase.	0.649
A0A136IJU7	A0A136IZG8	Uncharacterized protein.	Aldose 1-epimerase.	0.878
A0A136IJU7	A0A136J1B4	Uncharacterized protein.	Formyl transferase.	0.703
A0A136IJU7	A0A136J2J3	Uncharacterized protein.	NAD dependent epimerase/dehydratase.	0.868
A0A136IJU7	A0A136J2S8	Uncharacterized protein.	UDP-N-acetylglucosamine pyrophosphorylase.	0.637
A0A136IJU7	A0A136JC01	Uncharacterized protein.	dTDP-glucose 4,6-dehydratase.	0.870
A0A136IJU7	A0A136JEZ1	Uncharacterized protein.	UTP--glucose-1-phosphate uridylyltransferase.	0.614
A0A136IJU7	A0A136JF88	Uncharacterized protein.	Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, which is a biosynthetic precursor of chitin and also supplies the amino sugars for N-linked oligosaccharides of glycoproteins. Belongs to the phosphohexose mutase family.	0.700
A0A136IJU7	A0A136JJ23	Uncharacterized protein.	Putative UDP-galactose 4-epimerase.	0.776
A0A136ITL1	A0A136IJU7	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	Uncharacterized protein.	0.647
A0A136ITL1	A0A136IZG8	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	Aldose 1-epimerase.	0.960
A0A136ITL1	A0A136J2J3	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	NAD dependent epimerase/dehydratase.	0.886
A0A136ITL1	A0A136J2S8	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	UDP-N-acetylglucosamine pyrophosphorylase.	0.754
A0A136ITL1	A0A136JC01	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	dTDP-glucose 4,6-dehydratase.	0.900
A0A136ITL1	A0A136JEZ1	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	UTP--glucose-1-phosphate uridylyltransferase.	0.860
A0A136ITL1	A0A136JF88	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, which is a biosynthetic precursor of chitin and also supplies the amino sugars for N-linked oligosaccharides of glycoproteins. Belongs to the phosphohexose mutase family.	0.640
A0A136ITL1	A0A136JJ23	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	Putative UDP-galactose 4-epimerase.	0.730
A0A136ITZ8	A0A136IJU7	Mannitol-1-phosphate 5-dehydrogenase.	Uncharacterized protein.	0.649
A0A136ITZ8	A0A136IZG8	Mannitol-1-phosphate 5-dehydrogenase.	Aldose 1-epimerase.	0.589