A0A136IK06 protein (Microdochium bolleyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A136IK06

Nucleoside phosphorylase domain-containing protein. (225 aa)

Predicted Functional Partners:

A0A136IJT6

0.895

A0A136INE9

0.882

A0A136IJI5

0.852

A0A136JCF1

0.850

A0A136JJQ2

0.821

A0A136JJQ3

0.821

A0A136IJ41

0.819

A0A136IQP1

0.792

A0A136IWP9

0.792

A0A136IWR4

0.792

Your Current Organism:

Microdochium bolleyi

NCBI taxonomy Id: 196109
Other names: M. bolleyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A136IJ41	A0A136IK06	P-loop containing nucleoside triphosphate hydrolase protein.	Nucleoside phosphorylase domain-containing protein.	0.819
A0A136IJI5	A0A136IK06	Uncharacterized protein.	Nucleoside phosphorylase domain-containing protein.	0.852
A0A136IJT6	A0A136IK06	Uncharacterized protein.	Nucleoside phosphorylase domain-containing protein.	0.895
A0A136IK06	A0A136IJ41	Nucleoside phosphorylase domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.819
A0A136IK06	A0A136IJI5	Nucleoside phosphorylase domain-containing protein.	Uncharacterized protein.	0.852
A0A136IK06	A0A136IJT6	Nucleoside phosphorylase domain-containing protein.	Uncharacterized protein.	0.895
A0A136IK06	A0A136INE9	Nucleoside phosphorylase domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.882
A0A136IK06	A0A136IQP1	Nucleoside phosphorylase domain-containing protein.	Nitrate reductase.	0.792
A0A136IK06	A0A136IWP9	Nucleoside phosphorylase domain-containing protein.	Uncharacterized protein.	0.792
A0A136IK06	A0A136IWR4	Nucleoside phosphorylase domain-containing protein.	Uncharacterized protein.	0.792
A0A136IK06	A0A136JCF1	Nucleoside phosphorylase domain-containing protein.	Acyl transferase/acyl hydrolase/lysophospholipase.	0.850
A0A136IK06	A0A136JJQ2	Nucleoside phosphorylase domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.821
A0A136IK06	A0A136JJQ3	Nucleoside phosphorylase domain-containing protein.	Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.	0.821
A0A136INE9	A0A136IK06	P-loop containing nucleoside triphosphate hydrolase protein.	Nucleoside phosphorylase domain-containing protein.	0.882
A0A136IQP1	A0A136IK06	Nitrate reductase.	Nucleoside phosphorylase domain-containing protein.	0.792
A0A136IQP1	A0A136IWP9	Nitrate reductase.	Uncharacterized protein.	0.961
A0A136IQP1	A0A136IWR4	Nitrate reductase.	Uncharacterized protein.	0.958
A0A136IWP9	A0A136IK06	Uncharacterized protein.	Nucleoside phosphorylase domain-containing protein.	0.792
A0A136IWP9	A0A136IQP1	Uncharacterized protein.	Nitrate reductase.	0.961
A0A136IWP9	A0A136IWR4	Uncharacterized protein.	Uncharacterized protein.	0.958