STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136IST4Carotenoid oxygenase. (521 aa)    
Predicted Functional Partners:
A0A136IPD6
Xanthine dehydrogenase.
     
 0.601
A0A136JAJ3
Phytoene synthase.
     
 0.598
A0A136IN45
Sucrase/ferredoxin-like-domain-containing protein.
    
  0.503
A0A136IPT5
Uncharacterized protein.
     
 0.498
A0A136J221
Isoprenoid synthase domain-containing protein.
     
 0.457
A0A136J6Q2
O-acyltransferase.
   
 
  0.424
A0A136JC73
O-acyltransferase.
   
 
  0.424
A0A136JFN0
t-SNARE coiled-coil homology domain-containing protein.
   
 
  0.404
A0A136J9W9
Uncharacterized protein.
    
  0.401
A0A136JCA5
S-phase kinase-associated protein 1A; Belongs to the SKP1 family.
    
  0.401
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.