STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136ITY4P-loop containing nucleoside triphosphate hydrolase protein. (616 aa)    
Predicted Functional Partners:
A0A136J707
40S ribosomal protein S29.
  
 
 0.704
A0A136J9I5
Uncharacterized protein.
  
 
 0.697
A0A136IJX9
Exo-polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
 
  
   0.675
A0A136IQ36
Ribosomal L28 family-domain-containing protein.
  
  
 0.671
A0A136JIV4
Uncharacterized protein.
  
  
 0.609
A0A136IPV1
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
   0.571
A0A136JH46
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
   0.571
A0A136J824
Cysteinyl-tRNA synthetase.
  
  
 0.453
A0A136IN08
Histidine biosynthesis trifunctional protein.
   
 
 0.411
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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