STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136IUJ1Nucleoside-diphosphate-sugar epimerase. (339 aa)    
Predicted Functional Partners:
A0A136IVV4
Pyridoxal phosphate-dependent transferase.
   
 
 0.843
A0A136IN08
Histidine biosynthesis trifunctional protein.
    
  0.784
A0A136IX80
Threonine dehydratase.
   
 
 0.774
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.755
A0A136JE82
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
  0.744
A0A136J9B6
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
  0.740
A0A136JBI4
40S ribosomal protein S3-like protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.733
A0A136JJ56
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
  0.727
A0A136JAS0
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
  0.721
A0A136IVJ8
Ribosomal protein S19e.
   
  0.706
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.