A0A136IVH3 protein (Microdochium bolleyi) - STRING interaction network

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second shell of interactors

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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Score

A0A136IVH3

P-loop containing nucleoside triphosphate hydrolase protein. (1355 aa)

Predicted Functional Partners:

A0A136IQD6

0.866

A0A136IV73

0.689

A0A136JCN8

0.663

A0A136JAN4

0.569

A0A136J2Q8

0.531

A0A136IYZ5

0.490

A0A136J240

0.475

A0A136JFC6

0.472

A0A136IMC4

0.470

A0A136JFF3

0.469

Your Current Organism:

Microdochium bolleyi

NCBI taxonomy Id: 196109
Other names: M. bolleyi

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A136IMC4	A0A136IVH3	Regulator of G protein signaling domain-domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.470
A0A136IMC4	A0A136JFC6	Regulator of G protein signaling domain-domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.	0.568
A0A136IQD6	A0A136IV73	SPX domain-containing protein.	Siderophore biosynthesis protein.	0.421
A0A136IQD6	A0A136IVH3	SPX domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.866
A0A136IV73	A0A136IQD6	Siderophore biosynthesis protein.	SPX domain-containing protein.	0.421
A0A136IV73	A0A136IVH3	Siderophore biosynthesis protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.689
A0A136IV73	A0A136JCN8	Siderophore biosynthesis protein.	Acetyl-CoA carboxylase.	0.679
A0A136IVH3	A0A136IMC4	P-loop containing nucleoside triphosphate hydrolase protein.	Regulator of G protein signaling domain-domain-containing protein.	0.470
A0A136IVH3	A0A136IQD6	P-loop containing nucleoside triphosphate hydrolase protein.	SPX domain-containing protein.	0.866
A0A136IVH3	A0A136IV73	P-loop containing nucleoside triphosphate hydrolase protein.	Siderophore biosynthesis protein.	0.689
A0A136IVH3	A0A136IYZ5	P-loop containing nucleoside triphosphate hydrolase protein.	Iron-sulfur clusters transporter atm1.	0.490
A0A136IVH3	A0A136J240	P-loop containing nucleoside triphosphate hydrolase protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.475
A0A136IVH3	A0A136J2Q8	P-loop containing nucleoside triphosphate hydrolase protein.	Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.	0.531
A0A136IVH3	A0A136JAN4	P-loop containing nucleoside triphosphate hydrolase protein.	ANTH domain-domain-containing protein.	0.569
A0A136IVH3	A0A136JCN8	P-loop containing nucleoside triphosphate hydrolase protein.	Acetyl-CoA carboxylase.	0.663
A0A136IVH3	A0A136JFC6	P-loop containing nucleoside triphosphate hydrolase protein.	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.	0.472
A0A136IVH3	A0A136JFF3	P-loop containing nucleoside triphosphate hydrolase protein.	Protein disulfide-isomerase.	0.469
A0A136IYZ5	A0A136IVH3	Iron-sulfur clusters transporter atm1.	P-loop containing nucleoside triphosphate hydrolase protein.	0.490
A0A136J240	A0A136IVH3	USP domain-containing protein; Belongs to the peptidase C19 family.	P-loop containing nucleoside triphosphate hydrolase protein.	0.475
A0A136J2Q8	A0A136IVH3	Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.	P-loop containing nucleoside triphosphate hydrolase protein.	0.531

page 1 of 2

Network Stats

number of nodes:

8

number of edges:

12

average node degree:

3

avg. local clustering coefficient:

0.842

expected number of edges:

7

PPI enrichment p-value:

0.0565

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006412

Translation

7 of 123

1.49

2.13

3.86e-07

GO:0010467

Gene expression

9 of 261

1.27

1.79

4.51e-08

GO:0001682

tRNA 5-leader removal

2 of 2

2.73

1.53

0.0016

GO:0034641

Cellular nitrogen compound metabolic process

9 of 899

0.73

0.63

0.00024

GO:0044238

Primary metabolic process

9 of 1683

0.46

0.32

0.0227

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0003735

Structural constituent of ribosome

7 of 60

1.8

3.34

2.02e-09

GO:0003723

RNA binding

9 of 133

1.56

2.96

7.81e-11

GO:0019843

rRNA binding

5 of 46

1.77

2.35

3.21e-06

GO:0000049

tRNA binding

4 of 25

1.94

2.24

1.87e-05

GO:0004526

Ribonuclease P activity

2 of 2

2.73

1.48

0.0020

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005840

Ribosome

7 of 67

1.75

3.24

1.78e-09

GO:1990904

Ribonucleoprotein complex

2 of 15

1.86

1.0

0.0114

GO:0005622

Intracellular anatomical structure

8 of 1601

0.43

0.28

0.0478

Reference Publications (PubMed)

publication

(year) title

count in network

strength

signal

false discovery rate

PMID:29866043

(2018) Distinctive characters of Nostoc genomes in cyanolichens.

3 of 38

1.63

1.07

0.0057

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:3811

Ribosome

7 of 53

1.85

3.42

2.87e-09

CL:3785

Structural constituent of ribosome, and Regulation of translation

8 of 114

1.58

2.74

2.87e-09

CL:3813

Ribosome

4 of 33

1.82

2.05

3.08e-05

CL:3817

Large ribosomal subunit, and Ribosome

3 of 13

2.1

1.89

0.00019

CL:3879

Ribosome

3 of 19

1.93

1.64

0.00048

(more ...)

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

calo03010

Ribosome

7 of 56

1.83

3.61

3.88e-10

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0005840

Ribosome

4 of 42

1.71

1.61

0.00030

GOCC:0043232

Intracellular non-membrane-bounded organelle

5 of 239

1.05

0.81

0.0032

GOCC:0043229

Intracellular organelle

7 of 487

0.89

0.74

0.00097

GOCC:1990904

Ribonucleoprotein complex

2 of 23

1.67

0.68

0.0461

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0689

Ribosomal protein

7 of 66

1.76

3.23

2.26e-09

KW-0694

RNA-binding

6 of 66

1.69

2.68

8.53e-08

KW-0699

rRNA-binding

5 of 41

1.82

2.66

5.64e-07

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