STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136IXW6Lysine--tRNA ligase. (608 aa)    
Predicted Functional Partners:
A0A136JI69
tRNA synthetases class I-domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.973
A0A136IVH0
Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.966
A0A136JET8
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.949
A0A136IMY5
Leucyl-tRNA synthetase.
  
 0.948
A0A136J8M2
tRNA synthetases class I, catalytic domain-domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.945
A0A136IS82
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.933
A0A136J5H1
Uncharacterized protein.
   
 0.930
A0A136J0P3
RF_PROK_I domain-containing protein.
  
 
 0.896
A0A136JBX3
tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.893
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 
 0.879
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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