Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A136IWZ6 | A0A136IYT3 | Integral membrane protein sed5. | Sec34-like family protein. | 0.876 |
A0A136IWZ6 | A0A136J064 | Integral membrane protein sed5. | Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events. | 0.874 |
A0A136IWZ6 | A0A136J4P1 | Integral membrane protein sed5. | Dor1-like family-domain-containing protein. | 0.880 |
A0A136IWZ6 | A0A136J5D6 | Integral membrane protein sed5. | Sac2 family-domain-containing protein. | 0.455 |
A0A136IWZ6 | A0A136J8K1 | Integral membrane protein sed5. | Oligomeric golgi complex component, COG2-domain-containing protein. | 0.823 |
A0A136IWZ6 | A0A136JB12 | Integral membrane protein sed5. | Uncharacterized protein. | 0.810 |
A0A136IWZ6 | A0A136JDX9 | Integral membrane protein sed5. | Snare Ykt6; Belongs to the synaptobrevin family. | 0.999 |
A0A136IWZ6 | A0A136JFU7 | Integral membrane protein sed5. | Intra-golgi transport complex, subunit 4. | 0.882 |
A0A136IWZ6 | A0A136JJ28 | Integral membrane protein sed5. | t-SNARE. | 0.990 |
A0A136IYT3 | A0A136IWZ6 | Sec34-like family protein. | Integral membrane protein sed5. | 0.876 |
A0A136IYT3 | A0A136IZ06 | Sec34-like family protein. | Golgi transport complex subunit 5-domain-containing protein. | 0.875 |
A0A136IYT3 | A0A136J064 | Sec34-like family protein. | Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events. | 0.999 |
A0A136IYT3 | A0A136J4P1 | Sec34-like family protein. | Dor1-like family-domain-containing protein. | 0.999 |
A0A136IYT3 | A0A136J5D6 | Sec34-like family protein. | Sac2 family-domain-containing protein. | 0.847 |
A0A136IYT3 | A0A136J8K1 | Sec34-like family protein. | Oligomeric golgi complex component, COG2-domain-containing protein. | 0.999 |
A0A136IYT3 | A0A136JB12 | Sec34-like family protein. | Uncharacterized protein. | 0.998 |
A0A136IYT3 | A0A136JDX9 | Sec34-like family protein. | Snare Ykt6; Belongs to the synaptobrevin family. | 0.853 |
A0A136IYT3 | A0A136JFU7 | Sec34-like family protein. | Intra-golgi transport complex, subunit 4. | 0.999 |
A0A136IYT3 | A0A136JJ28 | Sec34-like family protein. | t-SNARE. | 0.880 |
A0A136IZ06 | A0A136IYT3 | Golgi transport complex subunit 5-domain-containing protein. | Sec34-like family protein. | 0.875 |
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