STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136IYW3Uncharacterized protein. (453 aa)    
Predicted Functional Partners:
A0A136JFB0
ERCC4 domain-containing protein.
    
 0.589
A0A136J6S6
DNA polymerase alpha/epsilon subunit B-domain-containing protein.
    
 0.581
A0A136JIE9
SMN domain-containing protein.
    
 0.573
A0A136J8C5
DNA polymerase.
   
 0.571
A0A136J5K9
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.538
A0A136JFF7
ER protein Pkr1-domain-containing protein.
    
 0.529
A0A136J6D4
WD40-repeat-containing domain protein.
    
  0.525
A0A136JGE8
Small nuclear ribonucleoprotein G.
    
  0.520
A0A136J9X4
DNA repair protein.
    
 0.519
A0A136J7U7
Small nuclear ribonucleoprotein Sm D2.
    
  0.512
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.