STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136J0G7Recombinational repair protein. (798 aa)    
Predicted Functional Partners:
A0A136JHV3
ATP-dependent DNA helicase srs2.
   
 
 0.927
A0A136J0V0
Vacuole morphology and inheritance protein 14.
 
  
   0.907
A0A136IS38
Uncharacterized protein.
    
 
 0.836
A0A136JEM7
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.833
A0A136JFB0
ERCC4 domain-containing protein.
   
 0.813
A0A136IU74
Pectinesterase; Involved in maceration and soft-rotting of plant tissue.
   
 
 0.798
A0A136IZ19
Uncharacterized protein.
   
 0.796
A0A136JC94
SNF2 family N-terminal domain-domain-containing protein.
  
  
0.757
A0A136J6P8
Ribonuclease H-like domain-containing protein.
   
 
 0.740
A0A136JJH9
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
 
   
  0.726
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
Server load: low (12%) [HD]