Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A136IS38 | A0A136IYX1 | A0A136IS38 | A0A136IYX1 | Uncharacterized protein. | DNA ligase. | 0.558 |
A0A136IS38 | A0A136J6P8 | A0A136IS38 | A0A136J6P8 | Uncharacterized protein. | Ribonuclease H-like domain-containing protein. | 0.998 |
A0A136IS38 | A0A136J8C5 | A0A136IS38 | A0A136J8C5 | Uncharacterized protein. | DNA polymerase. | 0.816 |
A0A136IS38 | A0A136JC95 | A0A136IS38 | A0A136JC95 | Uncharacterized protein. | DNA ligase. | 0.558 |
A0A136IS38 | A0A136JFL9 | A0A136IS38 | A0A136JFL9 | Uncharacterized protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.615 |
A0A136IS38 | A0A136JFN5 | A0A136IS38 | A0A136JFN5 | Uncharacterized protein. | Mysoin-binding motif of peroxisomes-domain-containing protein. | 0.615 |
A0A136IS38 | A0A136JJT7 | A0A136IS38 | A0A136JJT7 | Uncharacterized protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.868 |
A0A136IS38 | FEN1 | A0A136IS38 | A0A136J0X1 | Uncharacterized protein. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.953 |
A0A136IYX1 | A0A136IS38 | A0A136IYX1 | A0A136IS38 | DNA ligase. | Uncharacterized protein. | 0.558 |
A0A136IYX1 | A0A136J6P8 | A0A136IYX1 | A0A136J6P8 | DNA ligase. | Ribonuclease H-like domain-containing protein. | 0.664 |
A0A136IYX1 | A0A136J6S6 | A0A136IYX1 | A0A136J6S6 | DNA ligase. | DNA polymerase alpha/epsilon subunit B-domain-containing protein. | 0.790 |
A0A136IYX1 | A0A136J8C5 | A0A136IYX1 | A0A136J8C5 | DNA ligase. | DNA polymerase. | 0.931 |
A0A136IYX1 | A0A136JAC9 | A0A136IYX1 | A0A136JAC9 | DNA ligase. | Apyrimidinic endonuclease. | 0.816 |
A0A136IYX1 | A0A136JC95 | A0A136IYX1 | A0A136JC95 | DNA ligase. | DNA ligase. | 0.800 |
A0A136IYX1 | A0A136JFL9 | A0A136IYX1 | A0A136JFL9 | DNA ligase. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.968 |
A0A136IYX1 | A0A136JFN5 | A0A136IYX1 | A0A136JFN5 | DNA ligase. | Mysoin-binding motif of peroxisomes-domain-containing protein. | 0.968 |
A0A136IYX1 | A0A136JJT7 | A0A136IYX1 | A0A136JJT7 | DNA ligase. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.792 |
A0A136IYX1 | FEN1 | A0A136IYX1 | A0A136J0X1 | DNA ligase. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.969 |
A0A136J6P8 | A0A136IS38 | A0A136J6P8 | A0A136IS38 | Ribonuclease H-like domain-containing protein. | Uncharacterized protein. | 0.998 |
A0A136J6P8 | A0A136IYX1 | A0A136J6P8 | A0A136IYX1 | Ribonuclease H-like domain-containing protein. | DNA ligase. | 0.664 |
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