Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A136ILI6 | A0A136ITL5 | Leucine-rich repeat-domain-containing protein. | PWI domain-containing protein. | 0.984 |
A0A136ILI6 | A0A136J190 | Leucine-rich repeat-domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.991 |
A0A136ILI6 | A0A136J5K9 | Leucine-rich repeat-domain-containing protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.997 |
A0A136ILI6 | A0A136J7U7 | Leucine-rich repeat-domain-containing protein. | Small nuclear ribonucleoprotein Sm D2. | 0.997 |
A0A136ILI6 | A0A136J869 | Leucine-rich repeat-domain-containing protein. | Small nuclear ribonucleoprotein Sm D3. | 0.997 |
A0A136ILI6 | A0A136JFF7 | Leucine-rich repeat-domain-containing protein. | ER protein Pkr1-domain-containing protein. | 0.996 |
A0A136ILI6 | A0A136JGE8 | Leucine-rich repeat-domain-containing protein. | Small nuclear ribonucleoprotein G. | 0.996 |
A0A136ILI6 | A0A136JJQ7 | Leucine-rich repeat-domain-containing protein. | Sm domain-containing protein. | 0.996 |
A0A136ILI6 | A0A136JK05 | Leucine-rich repeat-domain-containing protein. | Nuclear cap-binding protein subunit 2. | 0.985 |
A0A136ILI6 | A0A136JKI9 | Leucine-rich repeat-domain-containing protein. | U1 small nuclear ribonucleo protein of 70kDa MW N terminal-domain-containing protein. | 0.990 |
A0A136ITL5 | A0A136ILI6 | PWI domain-containing protein. | Leucine-rich repeat-domain-containing protein. | 0.984 |
A0A136ITL5 | A0A136J190 | PWI domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.990 |
A0A136ITL5 | A0A136J5K9 | PWI domain-containing protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.831 |
A0A136ITL5 | A0A136J7U7 | PWI domain-containing protein. | Small nuclear ribonucleoprotein Sm D2. | 0.920 |
A0A136ITL5 | A0A136J869 | PWI domain-containing protein. | Small nuclear ribonucleoprotein Sm D3. | 0.901 |
A0A136ITL5 | A0A136JFF7 | PWI domain-containing protein. | ER protein Pkr1-domain-containing protein. | 0.909 |
A0A136ITL5 | A0A136JGE8 | PWI domain-containing protein. | Small nuclear ribonucleoprotein G. | 0.897 |
A0A136ITL5 | A0A136JJQ7 | PWI domain-containing protein. | Sm domain-containing protein. | 0.905 |
A0A136ITL5 | A0A136JK05 | PWI domain-containing protein. | Nuclear cap-binding protein subunit 2. | 0.988 |
A0A136ITL5 | A0A136JKI9 | PWI domain-containing protein. | U1 small nuclear ribonucleo protein of 70kDa MW N terminal-domain-containing protein. | 0.990 |
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