Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| A0A136IYF6 | A0A136J0M9 | Pre-rRNA processing nucleolar protein-like protein Sik1. | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | 0.949 |
| A0A136IYF6 | A0A136J1A9 | Pre-rRNA processing nucleolar protein-like protein Sik1. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.994 |
| A0A136IYF6 | A0A136J6B1 | Pre-rRNA processing nucleolar protein-like protein Sik1. | Pseudouridine synthase. | 0.985 |
| A0A136IYF6 | A0A136J6Q0 | Pre-rRNA processing nucleolar protein-like protein Sik1. | Fibrillarin-domain-containing protein. | 0.999 |
| A0A136IYF6 | A0A136J871 | Pre-rRNA processing nucleolar protein-like protein Sik1. | Pseudouridine synthase. | 0.995 |
| A0A136IYF6 | A0A136J8N7 | Pre-rRNA processing nucleolar protein-like protein Sik1. | H/ACA ribonucleo protein complex subunit 3. | 0.724 |
| A0A136IYF6 | A0A136J9Z6 | Pre-rRNA processing nucleolar protein-like protein Sik1. | ABC transporter. | 0.939 |
| A0A136IYF6 | A0A136JDG3 | Pre-rRNA processing nucleolar protein-like protein Sik1. | Armadillo-type protein. | 0.889 |
| A0A136IYF6 | A0A136JH14 | Pre-rRNA processing nucleolar protein-like protein Sik1. | Ribosome biogenesis protein. | 0.999 |
| A0A136IYF6 | A0A136JKJ8 | Pre-rRNA processing nucleolar protein-like protein Sik1. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.904 |
| A0A136J0M9 | A0A136IYF6 | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | Pre-rRNA processing nucleolar protein-like protein Sik1. | 0.949 |
| A0A136J0M9 | A0A136J1A9 | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.999 |
| A0A136J0M9 | A0A136J6B1 | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | Pseudouridine synthase. | 0.988 |
| A0A136J0M9 | A0A136J6Q0 | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | Fibrillarin-domain-containing protein. | 0.975 |
| A0A136J0M9 | A0A136J871 | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | Pseudouridine synthase. | 0.999 |
| A0A136J0M9 | A0A136J8N7 | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | H/ACA ribonucleo protein complex subunit 3. | 0.997 |
| A0A136J0M9 | A0A136J9Z6 | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | ABC transporter. | 0.610 |
| A0A136J0M9 | A0A136JDG3 | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | Armadillo-type protein. | 0.598 |
| A0A136J0M9 | A0A136JH14 | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | Ribosome biogenesis protein. | 0.957 |
| A0A136J0M9 | A0A136JKJ8 | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.831 |
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