A0A136J260 protein (Microdochium bolleyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A136J260

Uncharacterized protein. (730 aa)

Predicted Functional Partners:

A0A136JJ71

0.813

A0A136IZS7

0.798

A0A136J0B9

0.739

A0A136JBK9

0.698

A0A136JDC5

0.698

A0A136JJ84

0.695

A0A136J1B4

0.672

A0A136J883

0.607

A0A136ITT9

0.585

A0A136IUD5

0.585

Your Current Organism:

Microdochium bolleyi

NCBI taxonomy Id: 196109
Other names: M. bolleyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A136ITT9	A0A136J260	Uncharacterized protein.	Uncharacterized protein.	0.585
A0A136ITT9	A0A136JJ84	Uncharacterized protein.	Uncharacterized protein.	0.911
A0A136IUD5	A0A136IZS7	Thiamin diphosphate-binding protein.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.694
A0A136IUD5	A0A136J0B9	Thiamin diphosphate-binding protein.	Dihydrolipoyl dehydrogenase.	0.987
A0A136IUD5	A0A136J260	Thiamin diphosphate-binding protein.	Uncharacterized protein.	0.585
A0A136IUD5	A0A136J883	Thiamin diphosphate-binding protein.	Nucleoside diphosphate kinase.	0.518
A0A136IUD5	A0A136JBK9	Thiamin diphosphate-binding protein.	Uncharacterized protein.	0.973
A0A136IUD5	A0A136JDC5	Thiamin diphosphate-binding protein.	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.980
A0A136IUD5	A0A136JJ71	Thiamin diphosphate-binding protein.	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.994
A0A136IZS7	A0A136IUD5	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Thiamin diphosphate-binding protein.	0.694
A0A136IZS7	A0A136J0B9	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Dihydrolipoyl dehydrogenase.	0.998
A0A136IZS7	A0A136J260	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Uncharacterized protein.	0.798
A0A136IZS7	A0A136J883	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Nucleoside diphosphate kinase.	0.518
A0A136IZS7	A0A136JBK9	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Uncharacterized protein.	0.997
A0A136IZS7	A0A136JDC5	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.999
A0A136IZS7	A0A136JJ71	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.999
A0A136J0B9	A0A136IUD5	Dihydrolipoyl dehydrogenase.	Thiamin diphosphate-binding protein.	0.987
A0A136J0B9	A0A136IZS7	Dihydrolipoyl dehydrogenase.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.998
A0A136J0B9	A0A136J260	Dihydrolipoyl dehydrogenase.	Uncharacterized protein.	0.739
A0A136J0B9	A0A136J883	Dihydrolipoyl dehydrogenase.	Nucleoside diphosphate kinase.	0.416