Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A136IQ22 | A0A136IZG8 | Tryptophan synthase. | Aldose 1-epimerase. | 0.520 |
A0A136IQ22 | A0A136J2I9 | Tryptophan synthase. | Family 2 glycoside hydrolase. | 0.441 |
A0A136IYT5 | A0A136J2I9 | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | Family 2 glycoside hydrolase. | 0.481 |
A0A136IZG8 | A0A136IQ22 | Aldose 1-epimerase. | Tryptophan synthase. | 0.520 |
A0A136IZG8 | A0A136J2I9 | Aldose 1-epimerase. | Family 2 glycoside hydrolase. | 0.900 |
A0A136IZG8 | A0A136JIT2 | Aldose 1-epimerase. | Aldose 1-epimerase. | 0.874 |
A0A136J2I9 | A0A136IQ22 | Family 2 glycoside hydrolase. | Tryptophan synthase. | 0.441 |
A0A136J2I9 | A0A136IYT5 | Family 2 glycoside hydrolase. | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | 0.481 |
A0A136J2I9 | A0A136IZG8 | Family 2 glycoside hydrolase. | Aldose 1-epimerase. | 0.900 |
A0A136J2I9 | A0A136JCI5 | Family 2 glycoside hydrolase. | M20_dimer domain-containing protein. | 0.491 |
A0A136J2I9 | A0A136JIT2 | Family 2 glycoside hydrolase. | Aldose 1-epimerase. | 0.425 |
A0A136JCI5 | A0A136J2I9 | M20_dimer domain-containing protein. | Family 2 glycoside hydrolase. | 0.491 |
A0A136JIT2 | A0A136IZG8 | Aldose 1-epimerase. | Aldose 1-epimerase. | 0.874 |
A0A136JIT2 | A0A136J2I9 | Aldose 1-epimerase. | Family 2 glycoside hydrolase. | 0.425 |