STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136J368Fungal tRNA ligase phosphodiesterase domain-domain-containing protein. (903 aa)    
Predicted Functional Partners:
A0A136JBB3
KptA family-domain-containing protein.
      
 0.519
A0A136ILV7
Uncharacterized protein.
      
 0.518
A0A136IVJ7
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
      
 0.518
A0A136JDK8
tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]
      
 0.517
A0A136IXW8
2',3'-cyclic-nucleotide 3'-phosphodiesterase.
      
 0.515
A0A136JH03
tRNA_int_end_N2 domain-containing protein.
      
 0.513
A0A136JBT8
tRNA-splicing endonuclease subunit Sen15.
      
 0.499
A0A136IWY1
BZIP domain-containing protein.
      
 0.483
A0A136J0K1
Armadillo-type protein.
      
 0.452
A0A136JBC6
Phenylalanyl-tRNA synthetase.
      
 0.452
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.