STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136J6N0Protein trafficking Pga2. (162 aa)    
Predicted Functional Partners:
A0A136IWG2
Uncharacterized protein.
    
 0.751
A0A136J335
Actin family; Belongs to the actin family.
    
 0.745
A0A136J5N5
SWIRM domain-domain-containing protein.
    
 0.742
A0A136JI78
SWIB/MDM2 domain-containing protein.
    
 0.740
A0A136JC32
Uncharacterized protein.
    
 0.633
A0A136IWQ5
Uncharacterized protein.
    
 0.617
A0A136J3A8
Bromodomain-containing protein.
    
 0.617
A0A136JKI9
U1 small nuclear ribonucleo protein of 70kDa MW N terminal-domain-containing protein.
    
  0.614
A0A136JJS7
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
  0.559
A0A136J5V5
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
  0.521
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.