STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136J788Ribosome biogenesis protein Nop16. (257 aa)    
Predicted Functional Partners:
A0A136JIE5
RRM domain-containing protein.
   
 
 0.991
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
 
 0.988
A0A136JC20
Ribosomal protein L30, ferredoxin-like fold domain-containing protein.
   
 
 0.984
A0A136J4V3
Ribosomal protein S8e/ribosomal biogenesis NSA2.
   
 
 0.983
A0A136JHA0
RNA helicase.
   
 
 0.983
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.981
A0A136J7F7
Eukaryotic rRNA processing protein EBP2-domain-containing protein.
   
 
 0.980
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.979
A0A136JKE8
Ribosomal protein L24e.
   
 
 0.978
A0A136JK35
RNA processing factor 1.
   
 
 0.970
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.