STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136J7M0Ribosomal protein s13-like protein; Belongs to the universal ribosomal protein uS13 family. (134 aa)    
Predicted Functional Partners:
A0A136IM33
40S ribosomal protein S17.
   
 0.996
A0A136IUM5
S1-like domain-containing protein; Belongs to the eIF-1A family.
  
 0.996
A0A136IVJ8
Ribosomal protein S19e.
   
 0.996
A0A136IYC4
40S ribosomal protein S20.
  
 0.996
A0A136IYI5
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.996
A0A136J2Q3
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
  
 0.996
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.996
A0A136J707
40S ribosomal protein S29.
  
 0.996
A0A136J7H5
Ribosomal protein L4 domain-containing protein.
  
 0.996
A0A136J9B6
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
  
 0.996
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.