STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136J8B6Splicing factor 3a. (504 aa)    
Predicted Functional Partners:
A0A136ILI6
Leucine-rich repeat-domain-containing protein.
   
 0.998
A0A136IXE3
Pre-mRNA splicing factor PRP21 like protein-domain-containing protein.
   
 0.998
A0A136J3Q3
Splicing factor 3A subunit 2.
    
 0.997
A0A136JHK5
PSP domain-containing protein.
   
 0.997
A0A136J7E9
Uncharacterized protein.
    
 0.996
A0A136JF67
Uncharacterized protein.
   
 0.996
A0A136JK59
CPSF A subunit region-domain-containing protein.
   
 0.996
A0A136JFF7
ER protein Pkr1-domain-containing protein.
   
 0.995
A0A136JAY3
Splicing factor 3B subunit 10-domain-containing protein.
   
 0.994
A0A136JE05
Pre-mRNA splicing factor component-domain-containing protein.
   
 
 0.992
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.