A0A136J8V6 protein (Microdochium bolleyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A136J8V6

3-oxoacyl-acyl-carrier-protein reductase. (281 aa)

Predicted Functional Partners:

A0A136JBK1

0.730

A0A136IMN6

0.576

A0A136IK68

0.531

A0A136IPR6

0.498

A0A136J8A8

0.498

A0A136IYX9

0.497

A0A136J545

0.487

A0A136JFK1

0.479

A0A136JJL9

0.467

A0A136JE25

0.457

Your Current Organism:

Microdochium bolleyi

NCBI taxonomy Id: 196109
Other names: M. bolleyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A136IK68	A0A136J545	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.416
A0A136IK68	A0A136J8V6	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	3-oxoacyl-acyl-carrier-protein reductase.	0.531
A0A136IK68	A0A136JBK1	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.492
A0A136IK68	A0A136JE25	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Pex12 amino terminal region-domain-containing protein.	0.671
A0A136IK68	A0A136JFK1	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	TPR_REGION domain-containing protein.	0.863
A0A136IMN6	A0A136IPR6	Uncharacterized protein.	Beta-lactamase-like protein.	0.498
A0A136IMN6	A0A136IYX9	Uncharacterized protein.	3-oxoacyl-reductase.	0.845
A0A136IMN6	A0A136J545	Uncharacterized protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.482
A0A136IMN6	A0A136J8A8	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.498
A0A136IMN6	A0A136J8V6	Uncharacterized protein.	3-oxoacyl-acyl-carrier-protein reductase.	0.576
A0A136IMN6	A0A136JBK1	Uncharacterized protein.	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.795
A0A136IPR6	A0A136IMN6	Beta-lactamase-like protein.	Uncharacterized protein.	0.498
A0A136IPR6	A0A136IYX9	Beta-lactamase-like protein.	3-oxoacyl-reductase.	0.498
A0A136IPR6	A0A136J545	Beta-lactamase-like protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.857
A0A136IPR6	A0A136J8V6	Beta-lactamase-like protein.	3-oxoacyl-acyl-carrier-protein reductase.	0.498
A0A136IPR6	A0A136JJL9	Beta-lactamase-like protein.	3-oxoacyl-reductase.	0.498
A0A136IYX9	A0A136IMN6	3-oxoacyl-reductase.	Uncharacterized protein.	0.845
A0A136IYX9	A0A136IPR6	3-oxoacyl-reductase.	Beta-lactamase-like protein.	0.498
A0A136IYX9	A0A136J545	3-oxoacyl-reductase.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.482
A0A136IYX9	A0A136J8A8	3-oxoacyl-reductase.	2Fe-2S ferredoxin-type domain-containing protein.	0.498