STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136JA18MADS Box MCM1-like protein. (219 aa)    
Predicted Functional Partners:
A0A136INL5
RPEL repeat protein.
    
 0.992
A0A136JBV6
STE like transcription factor-domain-containing protein.
    
 0.914
A0A136JDU7
Homeobox domain-containing protein.
    
 0.913
A0A136JB67
GATA-type domain-containing protein.
    
 0.910
A0A136JE74
Uncharacterized protein.
    
 0.852
A0A136IN77
Uncharacterized protein.
    
 0.746
A0A136IS10
Protein kinase domain-containing protein.
    
 0.746
A0A136ISW5
Uncharacterized protein.
    
 0.746
A0A136ITF5
NACHT domain-containing protein.
    
 0.746
A0A136IV66
Protein kinase domain-containing protein.
    
 0.746
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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