STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136JAF5Short-chain dehydrogenase. (253 aa)    
Predicted Functional Partners:
A0A136J982
Serine hydrolase-domain-containing protein.
   
 
 0.776
A0A136JBA1
Dihydrofolate reductase-like domain-containing protein; Belongs to the dihydrofolate reductase family.
   
 
 0.776
A0A136IHX0
Uncharacterized protein.
    
  0.671
A0A136J5G2
Hamartin protein-domain-containing protein.
    
  0.671
A0A136J6S7
Heat shock protein 90.
    
  0.671
A0A136J731
Flavin reductase like domain-domain-containing protein.
    
  0.671
A0A136JHY0
Flavoprotein domain-containing protein.
   
 
  0.658
A0A136ITT8
Uncharacterized protein.
    
  0.588
A0A136J6N9
EF-hand protein; Belongs to the calmodulin family.
    
  0.588
A0A136JGL5
Uncharacterized protein.
    
  0.588
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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