A0A136JBL5 protein (Microdochium bolleyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A136JBL5

BZIP domain-containing protein. (580 aa)

Predicted Functional Partners:

A0A136JFK6

0.984

A0A136J205

0.696

A0A136J246

0.696

A0A136JFN0

0.682

A0A136JIE6

0.658

A0A136J9J7

0.657

A0A136JGY4

0.616

A0A136JIF8

0.616

A0A136IP53

0.509

A0A136IU57

0.509

Your Current Organism:

Microdochium bolleyi

NCBI taxonomy Id: 196109
Other names: M. bolleyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A136IP53	A0A136JBL5	BZIP domain-containing protein.	BZIP domain-containing protein.	0.509
A0A136IU57	A0A136JBL5	Uncharacterized protein.	BZIP domain-containing protein.	0.509
A0A136J205	A0A136J246	t-SNARE.	t-SNARE.	0.788
A0A136J205	A0A136J9J7	t-SNARE.	Vesicle-associated membrane protein 4.	0.983
A0A136J205	A0A136JBL5	t-SNARE.	BZIP domain-containing protein.	0.696
A0A136J205	A0A136JFN0	t-SNARE.	t-SNARE coiled-coil homology domain-containing protein.	0.979
A0A136J246	A0A136J205	t-SNARE.	t-SNARE.	0.788
A0A136J246	A0A136J9J7	t-SNARE.	Vesicle-associated membrane protein 4.	0.983
A0A136J246	A0A136JBL5	t-SNARE.	BZIP domain-containing protein.	0.696
A0A136J246	A0A136JFN0	t-SNARE.	t-SNARE coiled-coil homology domain-containing protein.	0.979
A0A136J9J7	A0A136J205	Vesicle-associated membrane protein 4.	t-SNARE.	0.983
A0A136J9J7	A0A136J246	Vesicle-associated membrane protein 4.	t-SNARE.	0.983
A0A136J9J7	A0A136JBL5	Vesicle-associated membrane protein 4.	BZIP domain-containing protein.	0.657
A0A136J9J7	A0A136JFN0	Vesicle-associated membrane protein 4.	t-SNARE coiled-coil homology domain-containing protein.	0.997
A0A136J9J7	A0A136JGY4	Vesicle-associated membrane protein 4.	P-loop containing nucleoside triphosphate hydrolase protein.	0.654
A0A136J9J7	A0A136JIE6	Vesicle-associated membrane protein 4.	Golgi matrix protein.	0.661
A0A136J9J7	A0A136JIF8	Vesicle-associated membrane protein 4.	Uncharacterized protein.	0.654
A0A136JBL5	A0A136IP53	BZIP domain-containing protein.	BZIP domain-containing protein.	0.509
A0A136JBL5	A0A136IU57	BZIP domain-containing protein.	Uncharacterized protein.	0.509
A0A136JBL5	A0A136J205	BZIP domain-containing protein.	t-SNARE.	0.696